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For the 2025 school year, there are 11 public schools serving 4,317 students in Baker City, OR (there are , serving 121 private students). 97% of all K-12 students in Baker City, OR are educated in public schools (compared to the OR state average of 90%).

The top ranked public schools in Baker City, OR are Haines Elementary School, Baker Web Academy and Baker Middle School. Overall testing rank is based on a school's combined math and reading proficiency test score ranking.

Baker City, OR public schools have an average math proficiency score of 37% (versus the Oregon public school average of 31%), and reading proficiency score of 52% (versus the 44% statewide average). Schools in Baker City have an average ranking of 9/10, which is in the top 20% of Oregon public schools.

Minority enrollment is 21% of the student body (majority Hispanic), which is less than the Oregon public school average of 42% (majority Hispanic).